WormBase Tree Display for Variation: WBVar00158426
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WBVar00158426 | Name | Public_name | WBVar00158426 | ||
---|---|---|---|---|---|
Other_name | haw11676 | ||||
haw120454 | |||||
cewivar00171580 | |||||
CE54002:p.Pro2Ser | |||||
M01G12.14.1:c.4C>T | |||||
HGVSg | CHROMOSOME_I:g.12108415G>A | ||||
Sequence_details | SMap | S_parent | Sequence | M01G12 | |
Flanking_sequences | taccctatagtttcaacttgaatcg | catccttcacagcgttcaatcaagt | |||
Mapping_target | M01G12 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01350939 | |||
WBVar00540319 | |||||
Status | Live | ||||
Affects | Gene | WBGene00010825 | |||
Transcript | M01G12.14.1 | VEP_consequence | missense_variant | ||
VEP_impact | MODERATE | ||||
HGVSc | M01G12.14.1:c.4C>T | ||||
HGVSp | CE54002:p.Pro2Ser | ||||
cDNA_position | 89 | ||||
CDS_position | 4 | ||||
Protein_position | 2 | ||||
Exon_number | 2/6 | ||||
Codon_change | Ccg/Tcg | ||||
Amino_acid_change | P/S | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw11676 | ||||
Method | WGS_Hawaiian_Waterston |