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WormBase Tree Display for Variation: WBVar00159289

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Name Class

WBVar00159289NamePublic_nameWBVar00159289
Other_nameuCE1-1335
haw12539
cewivar00172935
CE53082:p.Thr71=
T07D10.2b.1:c.213A>C
CE13377:p.Thr63=
T07D10.2a.1:c.189A>C
HGVSgCHROMOSOME_I:g.12621403A>C
Sequence_detailsSMapS_parentSequenceT07D10
Flanking_sequencesttctggtcacccttttcggtaacaccttctgatctatgtgatctacaaga
Mapping_targetT07D10
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (19)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
SNP_Swan
HistoryAcquires_mergeWBVar01288019
WBVar00267462
WBVar01352351
WBVar01426826
StatusLive
AffectsGeneWBGene00011582
TranscriptT07D10.2a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScT07D10.2a.1:c.189A>C
HGVSpCE13377:p.Thr63=
cDNA_position189
CDS_position189
Protein_position63
Exon_number2/6
Codon_changeacA/acC
Amino_acid_changeT
T07D10.2b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScT07D10.2b.1:c.213A>C
HGVSpCE53082:p.Thr71=
cDNA_position249
CDS_position213
Protein_position71
Exon_number4/9
Codon_changeacA/acC
Amino_acid_changeT
ReferenceWBPaper00037807
WBPaper00005369
Remark[20081124 db] this Variation was previously named hw12539
MethodWGS_Hawaiian_Waterston