WormBase Tree Display for Variation: WBVar00159800
expand all nodes | collapse all nodes | view schema
WBVar00159800 | Name | Public_name | WBVar00159800 | ||
---|---|---|---|---|---|
Other_name | haw13050 | ||||
haw121527 | |||||
cewivar00173692 | |||||
Y18D10A.6b.1:c.594+80T>C | |||||
Y18D10A.6a.1:c.672+80T>C | |||||
HGVSg | CHROMOSOME_I:g.12830415T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y18D10A | |
Flanking_sequences | taaattttttaaacgattttatcaa | tttacaaaaattaaatatttttctg | |||
Mapping_target | Y18D10A | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01353092 | |||
WBVar00541392 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003735 | |||
Transcript | Y18D10A.6b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y18D10A.6b.1:c.594+80T>C | ||||
Intron_number | 4/8 | ||||
Y18D10A.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y18D10A.6a.1:c.672+80T>C | ||||
Intron_number | 5/9 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw13050 | ||||
Method | WGS_Hawaiian_Waterston |