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WormBase Tree Display for Variation: WBVar00159992

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Name Class

WBVar00159992NamePublic_nameWBVar00159992
Other_namehaw13242
haw121672
cewivar00173951
CE27468:p.Tyr1889=
Y18D10A.13.1:c.5667C>T
HGVSgCHROMOSOME_I:g.12895872C>T
Sequence_detailsSMapS_parentSequenceY18D10A
Flanking_sequencesttgtgaaatgtgttggcggtgcgtaattgttgaggacaaggcaatgtatc
Mapping_targetY18D10A
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (14)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01353358
WBVar01288991
WBVar01427781
WBVar00541537
StatusLive
AffectsGeneWBGene00003905
TranscriptY18D10A.13.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY18D10A.13.1:c.5667C>T
HGVSpCE27468:p.Tyr1889=
cDNA_position5680
CDS_position5667
Protein_position1889
Exon_number19/25
Codon_changetaC/taT
Amino_acid_changeY
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw13242
MethodWGS_Hawaiian_Waterston