WormBase Tree Display for Variation: WBVar00159992
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WBVar00159992 | Name | Public_name | WBVar00159992 | ||
---|---|---|---|---|---|
Other_name | haw13242 | ||||
haw121672 | |||||
cewivar00173951 | |||||
CE27468:p.Tyr1889= | |||||
Y18D10A.13.1:c.5667C>T | |||||
HGVSg | CHROMOSOME_I:g.12895872C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y18D10A | |
Flanking_sequences | ttgtgaaatgtgttggcggtgcgta | attgttgaggacaaggcaatgtatc | |||
Mapping_target | Y18D10A | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (14) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01353358 | |||
WBVar01288991 | |||||
WBVar01427781 | |||||
WBVar00541537 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003905 | |||
Transcript | Y18D10A.13.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y18D10A.13.1:c.5667C>T | ||||
HGVSp | CE27468:p.Tyr1889= | ||||
cDNA_position | 5680 | ||||
CDS_position | 5667 | ||||
Protein_position | 1889 | ||||
Exon_number | 19/25 | ||||
Codon_change | taC/taT | ||||
Amino_acid_change | Y | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw13242 | ||||
Method | WGS_Hawaiian_Waterston |