WormBase Tree Display for Variation: WBVar00160371
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WBVar00160371 | Name | Public_name | WBVar00160371 | ||
---|---|---|---|---|---|
Other_name | haw13621 | ||||
haw121944 | |||||
cewivar00135409 | |||||
CE19343:p.Tyr436= | |||||
ZK1225.4.1:c.1308C>T | |||||
HGVSg | CHROMOSOME_I:g.13214362G>A | ||||
Sequence_details | SMap | S_parent | Sequence | ZK1225 | |
Flanking_sequences | aaatatcattcttcttccctaaggt | tatccttccattcgtccgtgtgtat | |||
Mapping_target | ZK1225 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00541809 | |||
WBVar01353896 | |||||
Status | Live | ||||
Affects | Gene | WBGene00014238 | |||
Transcript | ZK1225.4.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | ZK1225.4.1:c.1308C>T | ||||
HGVSp | CE19343:p.Tyr436= | ||||
cDNA_position | 1332 | ||||
CDS_position | 1308 | ||||
Protein_position | 436 | ||||
Exon_number | 8/9 | ||||
Codon_change | taC/taT | ||||
Amino_acid_change | Y | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw13621 | ||||
Method | WGS_Hawaiian_Waterston |