Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00160672

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00160672NamePublic_nameWBVar00160672
Other_namehaw13922
haw122161
cewivar00174262
Y40B1A.3d.1:c.1117+57A>G
Y40B1A.3b.1:c.1078+57A>G
Y40B1A.3e.1:c.994+57A>G
Y40B1A.3a.1:c.985+57A>G
Y40B1A.3c.1:c.1111+57A>G
HGVSgCHROMOSOME_I:g.13356664A>G
Sequence_detailsSMapS_parentSequenceY40B1A
Flanking_sequencesaccattttttgtctgaaaaaatttgaaatccaatttttacagccaaattc
Mapping_targetY40B1A
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01354347
WBVar00542026
StatusLive
AffectsGeneWBGene00012734
TranscriptY40B1A.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY40B1A.3c.1:c.1111+57A>G
Intron_number8/11
Y40B1A.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY40B1A.3e.1:c.994+57A>G
Intron_number6/8
Y40B1A.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY40B1A.3d.1:c.1117+57A>G
Intron_number8/11
Y40B1A.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY40B1A.3a.1:c.985+57A>G
Intron_number6/9
Y40B1A.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY40B1A.3b.1:c.1078+57A>G
Intron_number6/9
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw13922
MethodWGS_Hawaiian_Waterston