WormBase Tree Display for Variation: WBVar00161439

WBVar00161439 Name: Public_name: WBVar00161439
    Other_name: haw14689
      haw122644
      cewivar00003514
      W04A8.7a.1:c.4785C>T
      CE42634:p.Phe1595=
      CE54397:p.Phe1593=
      W04A8.7b.1:c.4779C>T
    HGVSg: CHROMOSOME_I:g.13885755C>T
  Sequence_details: SMap: S_parent: Sequence: Y71A12B
    Flanking_sequences: aagaatacaaatcaattgatgagtt ttgaaagatgcggagaagatttaca
    Mapping_target: Y71A12B
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (21)
    Laboratory: RW
      QX
      AX
    Person: WBPerson1562
      WBPerson4037
      WBPerson1730
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
      WGS_Andersen
    History: Acquires_merge: WBVar01434677
        WBVar01355393
        WBVar00542509
    Status: Live
  Affects: Gene: WBGene00006382
    Transcript: W04A8.7b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W04A8.7b.1:c.4779C>T
        HGVSp: CE54397:p.Phe1593=
        cDNA_position: 4779
        CDS_position: 4779
        Protein_position: 1593
        Exon_number: 14/16
        Codon_change: ttC/ttT
        Amino_acid_change: F
      W04A8.7a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W04A8.7a.1:c.4785C>T
        HGVSp: CE42634:p.Phe1595=
        cDNA_position: 4787
        CDS_position: 4785
        Protein_position: 1595
        Exon_number: 15/17
        Codon_change: ttC/ttT
        Amino_acid_change: F
  Reference: WBPaper00038208
    WBPaper00040707
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw14689
  Method: WGS_Hawaiian_Waterston