WormBase Tree Display for Variation: WBVar00161443
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WBVar00161443 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00161443 | |||
Other_name | haw14693 | ||||
cewivar00136234 | |||||
W04A8.7b.1:c.*20A>T | |||||
W04A8.7a.1:c.*20A>T | |||||
HGVSg | CHROMOSOME_I:g.13887229A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y71A12B | |
Flanking_sequences | ttttaaaatgatttaaaaaaaaaaa | ttttaattttttctttaggcacata | |||
Mapping_target | Y71A12B | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01355397 | |||
Status | Live | ||||
Affects | Gene | WBGene00006382 | |||
Transcript | W04A8.7b.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W04A8.7b.1:c.*20A>T | ||||
cDNA_position | 5249 | ||||
Exon_number | 16/16 | ||||
W04A8.7a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W04A8.7a.1:c.*20A>T | ||||
cDNA_position | 5257 | ||||
Exon_number | 17/17 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw14693 | ||||
Method | WGS_Hawaiian_Waterston |