WormBase Tree Display for Variation: WBVar00161756
expand all nodes | collapse all nodes | view schema
WBVar00161756 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00161756 | |||
Other_name | haw15006 | ||||
cewivar00003944 | |||||
C49A1.4b.3:c.1324-700C>T | |||||
C49A1.4b.1:c.1324-700C>T | |||||
C49A1.4a.1:c.1426-700C>T | |||||
C49A1.4b.2:c.1324-700C>T | |||||
HGVSg | CHROMOSOME_I:g.14221659G>A | ||||
Sequence_details | SMap | S_parent | Sequence | C49A1 | |
Flanking_sequences | actttttgataactccgatatattt | aagttacaggcctttaaagttaggc | |||
Mapping_target | C49A1 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (18) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01428255 | |||
WBVar01289478 | |||||
WBVar01355902 | |||||
Status | Live | ||||
Affects | Gene | WBGene00001377 | |||
Transcript | C49A1.4b.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C49A1.4b.3:c.1324-700C>T | ||||
Intron_number | 7/8 | ||||
C49A1.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C49A1.4b.1:c.1324-700C>T | ||||
Intron_number | 9/10 | ||||
C49A1.4b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C49A1.4b.2:c.1324-700C>T | ||||
Intron_number | 8/8 | ||||
C49A1.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C49A1.4a.1:c.1426-700C>T | ||||
Intron_number | 9/10 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw15006 | ||||
Method | WGS_Hawaiian_Waterston |