WormBase Tree Display for Variation: WBVar00161800
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| WBVar00161800 | Name | Public_name | WBVar00161800 | ||
|---|---|---|---|---|---|
| Other_name | uCE1-1518 | ||||
| haw15050 | |||||
| cewivar00174845 | |||||
| CE23636:p.Ser647= | |||||
| F09C3.1.1:c.1941C>T | |||||
| HGVSg | CHROMOSOME_I:g.14266541C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F09C3 | |
| Flanking_sequences | atgcggcggcgacaaagatacagag | cattataaagtgttcagaaatcgca | |||
| Mapping_target | F09C3 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
| WGS_De_Bono | |||||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Swan | |||||
| History | Acquires_merge | WBVar01355973 | |||
| WBVar00267620 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003980 | |||
| Transcript | F09C3.1.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F09C3.1.1:c.1941C>T | ||||
| HGVSp | CE23636:p.Ser647= | ||||
| cDNA_position | 1958 | ||||
| CDS_position | 1941 | ||||
| Protein_position | 647 | ||||
| Exon_number | 5/14 | ||||
| Codon_change | agC/agT | ||||
| Amino_acid_change | S | ||||
| Reference | WBPaper00037807 | ||||
| WBPaper00005369 | |||||
| Remark | [20081124 db] this Variation was previously named hw15050 | ||||
| Method | WGS_Hawaiian_Waterston |
