WormBase Tree Display for Variation: WBVar00161897
expand all nodes | collapse all nodes | view schema
WBVar00161897 | Name | Public_name | WBVar00161897 | ||
---|---|---|---|---|---|
Other_name | haw15147 | ||||
haw123007 | |||||
cewivar00004271 | |||||
Y105E8A.1b.1:c.235-100G>A | |||||
Y105E8A.1a.1:c.235-100G>A | |||||
HGVSg | CHROMOSOME_I:g.14342359C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y105E8A | |
Flanking_sequences | ctgaaatttgagactgcttttttag | ccagaaattttgagtttaactgaaa | |||
Mapping_target | Y105E8A | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (18) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01428579 | |||
WBVar00542872 | |||||
WBVar01356169 | |||||
WBVar01289831 | |||||
Status | Live | ||||
Affects | Gene | WBGene00013666 | |||
Transcript | Y105E8A.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.1b.1:c.235-100G>A | ||||
Intron_number | 2/4 | ||||
Y105E8A.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.1a.1:c.235-100G>A | ||||
Intron_number | 1/4 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw15147 | ||||
Method | WGS_Hawaiian_Waterston |