WormBase Tree Display for Variation: WBVar00162229
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| WBVar00162229 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00162229 | |||
| Other_name | haw15479 | ||||
| cewivar00175028 | |||||
| Y105E8A.25e.1:c.2151-260A>T | |||||
| Y105E8A.25c.1:c.2802-260A>T | |||||
| Y105E8A.25f.1:c.2580-260A>T | |||||
| Y105E8A.25g.1:c.3780-260A>T | |||||
| Y105E8A.25d.1:c.2235-260A>T | |||||
| Y105E8A.25a.1:c.4077-260A>T | |||||
| Y105E8A.25b.1:c.4524-260A>T | |||||
| HGVSg | CHROMOSOME_I:g.14570624T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y105E8A | |
| Flanking_sequences | ttttcgcgattttcacgacaaattt | taaaaaattagtgattagattagta | |||
| Mapping_target | Y105E8A | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01356586 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00013682 | |||
| Transcript | Y105E8A.25c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8A.25c.1:c.2802-260A>T | ||||
| Intron_number | 13/14 | ||||
| Y105E8A.25f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8A.25f.1:c.2580-260A>T | ||||
| Intron_number | 12/13 | ||||
| Y105E8A.25b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8A.25b.1:c.4524-260A>T | ||||
| Intron_number | 21/24 | ||||
| Y105E8A.25d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8A.25d.1:c.2235-260A>T | ||||
| Intron_number | 8/9 | ||||
| Y105E8A.25e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8A.25e.1:c.2151-260A>T | ||||
| Intron_number | 7/8 | ||||
| Y105E8A.25a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8A.25a.1:c.4077-260A>T | ||||
| Intron_number | 20/22 | ||||
| Y105E8A.25g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8A.25g.1:c.3780-260A>T | ||||
| Intron_number | 20/21 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw15479 | ||||
| Method | WGS_Hawaiian_Waterston |
