WormBase Tree Display for Variation: WBVar00162251
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WBVar00162251 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00162251 | |||
Other_name | haw15501 | ||||
cewivar00004739 | |||||
Y105E8A.25a.1:c.1635-1516A>G | |||||
Y105E8A.25c.1:c.360-1516A>G | |||||
Y105E8A.25b.1:c.2072+543A>G | |||||
Y105E8A.25g.1:c.1338-1516A>G | |||||
Y105E8A.25f.1:c.138-1516A>G | |||||
HGVSg | CHROMOSOME_I:g.14588655T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y105E8A | |
Flanking_sequences | tttttttgaaaaacgtgaataattt | gaaaaaaaagtctttctgaaatagt | |||
Mapping_target | Y105E8A | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (13) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01429125 | |||
WBVar01356616 | |||||
Status | Live | ||||
Affects | Gene | WBGene00013682 | |||
Transcript | Y105E8A.25c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.25c.1:c.360-1516A>G | ||||
Intron_number | 3/14 | ||||
Y105E8A.25f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.25f.1:c.138-1516A>G | ||||
Intron_number | 2/13 | ||||
Y105E8A.25b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.25b.1:c.2072+543A>G | ||||
Intron_number | 11/24 | ||||
Y105E8A.25a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.25a.1:c.1635-1516A>G | ||||
Intron_number | 10/22 | ||||
Y105E8A.25g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.25g.1:c.1338-1516A>G | ||||
Intron_number | 10/21 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw15501 | ||||
Method | WGS_Hawaiian_Waterston |