WormBase Tree Display for Variation: WBVar00162420

WBVar00162420 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00162420
    Other_name: haw15670
      cewivar00175123
      Y54E5A.8a.1:c.74-54T>A
      Y54E5A.6.1:c.-2+1198A>T
    HGVSg: CHROMOSOME_I:g.14717021T>A
  Sequence_details: SMap: S_parent: Sequence: Y54E5A
    Flanking_sequences: ttcaacgaagtatgcaattacgcta accgcactttttctaggtctcgaag
    Mapping_target: Y54E5A
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00006629 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01356875
        WBVar01429390
    Status: Live
  Affects: Gene: WBGene00013203
      WBGene00013201
    Transcript: Y54E5A.6.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E5A.6.1:c.-2+1198A>T
        Intron_number: 1/8
      Y54E5A.8a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E5A.8a.1:c.74-54T>A
        Intron_number: 2/7
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw15670
  Method: WGS_Hawaiian_Waterston