WormBase Tree Display for Variation: WBVar00162647
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WBVar00162647 | Name | Public_name | WBVar00162647 | |||
---|---|---|---|---|---|---|
Other_name | haw15897 | |||||
haw123472 | ||||||
cewivar00175266 | ||||||
F11C3.2.1:c.44T>G | ||||||
CE51321:p.Leu15Arg | ||||||
HGVSg | CHROMOSOME_I:g.14872205T>G | |||||
Sequence_details | SMap | S_parent | Sequence | F11C3 | ||
Flanking_sequences | gagccatccttgacacgttggacgc | gagtagaaggttttttctattgaat | ||||
Mapping_target | F11C3 | |||||
Type_of_mutation | Substitution | T | G | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | ||||||
WGS_Yanai | ||||||
Million_mutation_project_reanalysis | ||||||
WBStrain00022850 | From_analysis | WGS_De_Bono | ||||
Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | RW | |||||
AX | ||||||
Person | WBPerson1562 | |||||
WBPerson4037 | ||||||
Analysis | WGS_Hawaiian_Waterston | |||||
WGS_De_Bono | ||||||
WGS_Yanai | ||||||
Million_mutation_project_reanalysis | ||||||
History | Acquires_merge | WBVar00543337 | ||||
WBVar01357212 | ||||||
WBVar01290659 | ||||||
Status | Live | |||||
Affects | Gene | WBGene00006845 | ||||
Transcript | F11C3.2.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0.21 | tolerated_low_confidence | ||||
PolyPhen | 0 | benign | ||||
HGVSc | F11C3.2.1:c.44T>G | |||||
HGVSp | CE51321:p.Leu15Arg | |||||
cDNA_position | 94 | |||||
CDS_position | 44 | |||||
Protein_position | 15 | |||||
Exon_number | 2/11 | |||||
Codon_change | cTg/cGg | |||||
Amino_acid_change | L/R | |||||
Reference | WBPaper00038208 | |||||
WBPaper00037807 | ||||||
Remark | [20081124 db] this Variation was previously named hw15897 | |||||
Method | WGS_Hawaiian_Waterston |