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WormBase Tree Display for Variation: WBVar00162680

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Name Class

WBVar00162680NamePublic_nameWBVar00162680
Other_nameuCE1-1579
haw15930
haw123502
cewivar00175314
ZK270.2d.1:c.277+111A>G
ZK270.2a.1:c.277+111A>G
ZK270.2e.1:c.310+111A>G
ZK270.2b.1:c.277+111A>G
HGVSgCHROMOSOME_I:g.14896921T>C
Sequence_detailsSMapS_parentSequenceZK270
Flanking_sequencesatatttttatttacttgaaacagcttccaaaaatttcaaggcagtttttt
Mapping_targetZK270
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Swan
WGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
SNP_Swan
HistoryAcquires_mergeWBVar00543367
WBVar01357273
WBVar00267673
StatusLive
AffectsGeneWBGene00001488
TranscriptZK270.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK270.2b.1:c.277+111A>G
Intron_number3/12
ZK270.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK270.2d.1:c.277+111A>G
Intron_number2/14
ZK270.2e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK270.2e.1:c.310+111A>G
Intron_number4/13
ZK270.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK270.2a.1:c.277+111A>G
Intron_number3/13
ReferenceWBPaper00038208
WBPaper00037807
WBPaper00005369
Remark[20081124 db] this Variation was previously named hw15930
MethodWGS_Hawaiian_Waterston