WormBase Tree Display for Variation: WBVar00162784
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WBVar00162784 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00162784 | |||
Other_name | haw16034 | ||||
cewivar00005380 | |||||
ZK337.1c.2:c.4098-253C>T | |||||
ZK337.1a.2:c.4074-253C>T | |||||
ZK337.1c.1:c.4098-253C>T | |||||
ZK337.1a.1:c.4074-253C>T | |||||
ZK337.1b.1:c.4107-253C>T | |||||
HGVSg | CHROMOSOME_I:g.15000656C>T | ||||
Sequence_details | SMap | S_parent | Sequence | ZK337 | |
Flanking_sequences | caattactcatttttttttcattat | tctatttaaacattttagtggtcgg | |||
Mapping_target | ZK337 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (14) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01290800 | |||
Status | Live | ||||
Affects | Gene | WBGene00013969 | |||
Transcript | ZK337.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK337.1a.1:c.4074-253C>T | ||||
Intron_number | 16/19 | ||||
ZK337.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK337.1b.1:c.4107-253C>T | ||||
Intron_number | 15/19 | ||||
ZK337.1a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK337.1a.2:c.4074-253C>T | ||||
Intron_number | 15/18 | ||||
ZK337.1c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK337.1c.2:c.4098-253C>T | ||||
Intron_number | 15/18 | ||||
ZK337.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK337.1c.1:c.4098-253C>T | ||||
Intron_number | 16/19 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw16034 | ||||
Method | WGS_Hawaiian_Waterston |