WormBase Tree Display for Variation: WBVar00163529
expand all nodes | collapse all nodes | view schema
WBVar00163529 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00163529 | |||
Other_name | haw16779 | ||||
cewivar00175945 | |||||
C08G5.3b.1:n.306A>T | |||||
C08G5.3a.1:n.306A>T | |||||
HGVSg | CHROMOSOME_II:g.744778T>A | ||||
Sequence_details | SMap | S_parent | Sequence | C08G5 | |
Flanking_sequences | ctgacaatacagacgaatagaattg | taccactgttatcctcggcagaggt | |||
Mapping_target | C08G5 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01358564 | |||
WBVar01292665 | |||||
Status | Live | ||||
Affects | Gene | WBGene00015616 | |||
Pseudogene | C08G5.3a | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C08G5.3a.1:n.306A>T | ||||
cDNA_position | 306 | ||||
Exon_number | 2/9 | ||||
C08G5.3b | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C08G5.3b.1:n.306A>T | ||||
cDNA_position | 306 | ||||
Exon_number | 2/10 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw16779 | ||||
Method | WGS_Hawaiian_Waterston |