WormBase Tree Display for Variation: WBVar00164297
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WBVar00164297 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00164297 | |||
Other_name | haw17547 | ||||
cewivar00078827 | |||||
W09B6.4d.1:c.194+2579G>A | |||||
W09B6.1c.1:c.157+725C>T | |||||
W09B6.4a.2:c.-8+2580G>A | |||||
W09B6.1a.1:c.-177+725C>T | |||||
HGVSg | CHROMOSOME_II:g.1137772C>T | ||||
Sequence_details | SMap | S_parent | Sequence | W09B6 | |
Flanking_sequences | acatgaaaatttgggtttaagaaat | tggagcgattttcaaaaaaaaaaaa | |||
Mapping_target | W09B6 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (11) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01359746 | |||
Status | Live | ||||
Affects | Gene | WBGene00021104 | |||
WBGene00004076 | |||||
Transcript | W09B6.4a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W09B6.4a.2:c.-8+2580G>A | ||||
Intron_number | 2/9 | ||||
W09B6.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W09B6.1c.1:c.157+725C>T | ||||
Intron_number | 2/10 | ||||
W09B6.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W09B6.1a.1:c.-177+725C>T | ||||
Intron_number | 2/12 | ||||
W09B6.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W09B6.4d.1:c.194+2579G>A | ||||
Intron_number | 2/7 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw17547 | ||||
Method | WGS_Hawaiian_Waterston |