WormBase Tree Display for Variation: WBVar00164320
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| WBVar00164320 | Name | Public_name | WBVar00164320 | ||
|---|---|---|---|---|---|
| Other_name | haw17570 | ||||
| haw124763 | |||||
| cewivar00176662 | |||||
| W09B6.1c.1:c.2712+148C>T | |||||
| W09B6.1a.3:c.2379+148C>T | |||||
| W09B6.1a.2:c.2379+148C>T | |||||
| W09B6.1b.1:c.2201+580C>T | |||||
| W09B6.1a.4:c.2379+148C>T | |||||
| W09B6.1a.1:c.2379+148C>T | |||||
| HGVSg | CHROMOSOME_II:g.1148146C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | W09B6 | |
| Flanking_sequences | tattttccgagaaaaatgtcgattt | acagctggaatttgaatttttcgcc | |||
| Mapping_target | W09B6 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01293989 | |||
| WBVar01359771 | |||||
| WBVar00544628 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004076 | |||
| Transcript | W09B6.1a.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W09B6.1a.2:c.2379+148C>T | ||||
| Intron_number | 6/9 | ||||
| W09B6.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W09B6.1c.1:c.2712+148C>T | ||||
| Intron_number | 8/10 | ||||
| W09B6.1a.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W09B6.1a.3:c.2379+148C>T | ||||
| Intron_number | 7/10 | ||||
| W09B6.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W09B6.1a.1:c.2379+148C>T | ||||
| Intron_number | 9/12 | ||||
| W09B6.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W09B6.1b.1:c.2201+580C>T | ||||
| Intron_number | 4/5 | ||||
| W09B6.1a.4 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W09B6.1a.4:c.2379+148C>T | ||||
| Intron_number | 6/10 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw17570 | ||||
| Method | WGS_Hawaiian_Waterston |
