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WormBase Tree Display for Variation: WBVar00164450

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Name Class

WBVar00164450NamePublic_nameWBVar00164450
Other_namehaw17700
haw124859
cewivar00176766
F53A10.2b.1:c.-786-1980T>C
F53A10.2a.1:c.313-1980T>C
F53A10.2b.3:c.-786-1980T>C
F53A10.2d.1:c.130-1980T>C
HGVSgCHROMOSOME_II:g.1223788T>C
Sequence_detailsSMapS_parentSequenceF53A10
Flanking_sequencestataagcctaagcataagacttatctgagcctaaactgtgtttaagctta
Mapping_targetF53A10
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01359947
WBVar01294304
WBVar00544724
StatusLive
AffectsGeneWBGene00018734
TranscriptF53A10.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A10.2d.1:c.130-1980T>C
Intron_number2/9
F53A10.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A10.2b.1:c.-786-1980T>C
Intron_number3/12
F53A10.2b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A10.2b.3:c.-786-1980T>C
Intron_number2/11
F53A10.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A10.2a.1:c.313-1980T>C
Intron_number4/12
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw17700
MethodWGS_Hawaiian_Waterston