WormBase Tree Display for Variation: WBVar00164509
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WBVar00164509 | Name | Public_name | WBVar00164509 | ||
---|---|---|---|---|---|
Other_name | uCE2-736 | ||||
haw17759 | |||||
cewivar00176838 | |||||
F47F6.1d.1:c.152-2312T>A | |||||
F47F6.1f.1:c.152-2312T>A | |||||
HGVSg | CHROMOSOME_II:g.1246347A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F47F6 | |
Flanking_sequences | tctagaaatctgtgtgaattttttt | aaattttgctgagtagcgacttata | |||
Mapping_target | F47F6 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
WGS_De_Bono | |||||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
History | Acquires_merge | WBVar00267914 | |||
WBVar01360064 | |||||
Status | Live | ||||
Affects | Gene | WBGene00018572 | |||
Transcript | F47F6.1d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F47F6.1d.1:c.152-2312T>A | ||||
Intron_number | 1/9 | ||||
F47F6.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F47F6.1f.1:c.152-2312T>A | ||||
Intron_number | 1/5 | ||||
Reference | WBPaper00037807 | ||||
WBPaper00005369 | |||||
Remark | [20081124 db] this Variation was previously named hw17759 | ||||
Method | WGS_Hawaiian_Waterston |