WormBase Tree Display for Variation: WBVar00165378
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| WBVar00165378 | Name | Public_name | WBVar00165378 | ||
|---|---|---|---|---|---|
| Other_name | haw18628 | ||||
| haw125554 | |||||
| cewivar00178207 | |||||
| F36H5.13.1:c.192G>A | |||||
| CE46465:p.Pro64= | |||||
| F36H5.13.2:c.192G>A | |||||
| HGVSg | CHROMOSOME_II:g.1749162C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F36H5 | |
| Flanking_sequences | cggtttgcccaataaccagaaatag | ggaacgatttttaattctattgatc | |||
| Mapping_target | F36H5 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01296183 | |||
| WBVar01361383 | |||||
| WBVar00545419 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00206519 | |||
| Transcript | F36H5.13.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F36H5.13.1:c.192G>A | ||||
| HGVSp | CE46465:p.Pro64= | ||||
| cDNA_position | 1164 | ||||
| CDS_position | 192 | ||||
| Protein_position | 64 | ||||
| Exon_number | 4/5 | ||||
| Codon_change | ccG/ccA | ||||
| Amino_acid_change | P | ||||
| F36H5.13.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F36H5.13.2:c.192G>A | ||||
| HGVSp | CE46465:p.Pro64= | ||||
| cDNA_position | 297 | ||||
| CDS_position | 192 | ||||
| Protein_position | 64 | ||||
| Exon_number | 3/4 | ||||
| Codon_change | ccG/ccA | ||||
| Amino_acid_change | P | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw18628 | ||||
| Method | WGS_Hawaiian_Waterston |
