WormBase Tree Display for Variation: WBVar00165445
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WBVar00165445 | Name | Public_name | WBVar00165445 | ||
---|---|---|---|---|---|
Other_name | haw18695 | ||||
cewivar00463109 | |||||
F36H5.14.1:c.*334A>C | |||||
C08F1.4a.3:c.-75A>C | |||||
C08F1.4a.2:c.-75A>C | |||||
C08F1.4a.1:c.-75A>C | |||||
HGVSg | CHROMOSOME_II:g.1776235A>C | ||||
Sequence_details | SMap | S_parent | Sequence | C08F1 | |
Flanking_sequences | atcaaaaatttggcacgtcaaatta | tgttcaatttgcgtattaggccgaa | |||
Mapping_target | C08F1 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00219271 | |||
WBGene00015608 | |||||
Transcript | F36H5.14.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F36H5.14.1:c.*334A>C | ||||
cDNA_position | 611 | ||||
Exon_number | 5/5 | ||||
C08F1.4a.3 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C08F1.4a.3:c.-75A>C | ||||
cDNA_position | 436 | ||||
Exon_number | 1/11 | ||||
C08F1.4a.2 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C08F1.4a.2:c.-75A>C | ||||
cDNA_position | 387 | ||||
Exon_number | 2/12 | ||||
C08F1.4a.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C08F1.4a.1:c.-75A>C | ||||
cDNA_position | 320 | ||||
Exon_number | 2/12 | ||||
Remark | [20081124 db] this Variation was previously named hw18695 | ||||
Method | WGS_Hawaiian_Waterston |