WormBase Tree Display for Variation: WBVar00165460

WBVar00165460 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00165460
    Other_name: haw18710
      haw125609
      cewivar00178511
      C08F1.4a.3:c.759T>A
      CE27059:p.Ile253=
      C08F1.4a.1:c.759T>A
      C08F1.4b.1:c.*86T>A
      C08F1.4a.2:c.759T>A
    HGVSg: CHROMOSOME_II:g.1777252T>A
  Sequence_details: SMap: S_parent: Sequence: C08F1
    Flanking_sequences: atgacaatgtttcaaagaagttaat caaacaaaatgtacgttcaatttgg
    Mapping_target: C08F1
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022878 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023191 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00545474
    Status: Live
  Affects: Gene: WBGene00015608
    Transcript: C08F1.4b.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C08F1.4b.1:c.*86T>A
        cDNA_position: 764
        Exon_number: 6/10
      C08F1.4a.3 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C08F1.4a.3:c.759T>A
        HGVSp: CE27059:p.Ile253=
        cDNA_position: 1269
        CDS_position: 759
        Protein_position: 253
        Exon_number: 6/11
        Codon_change: atT/atA
        Amino_acid_change: I
      C08F1.4a.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C08F1.4a.2:c.759T>A
        HGVSp: CE27059:p.Ile253=
        cDNA_position: 1220
        CDS_position: 759
        Protein_position: 253
        Exon_number: 7/12
        Codon_change: atT/atA
        Amino_acid_change: I
      C08F1.4a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C08F1.4a.1:c.759T>A
        HGVSp: CE27059:p.Ile253=
        cDNA_position: 1153
        CDS_position: 759
        Protein_position: 253
        Exon_number: 7/12
        Codon_change: atT/atA
        Amino_acid_change: I
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw18710
  Method: WGS_Hawaiian_Waterston