WormBase Tree Display for Variation: WBVar00165711

WBVar00165711 Name: Public_name: WBVar00165711
    Other_name: uCE2-939
      haw18961
      cewivar00179291
      F52C6.5:n.916-3C>T
    HGVSg: CHROMOSOME_II:g.1909354C>T
  Sequence_details: SMap: S_parent: Sequence: F52C6
    Flanking_sequences: agtatgttcattcaactcaatattt aggaaattgcaaattagaagacaag
    Mapping_target: F52C6
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
          WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      SNP_Swan
    History: Acquires_merge: WBVar00268100
        WBVar01361860
    Status: Live
  Affects: Gene: WBGene00018662
    Pseudogene: F52C6.5 VEP_consequence: splice_region_variant,intron_variant,non_coding_transcript_variant
        VEP_impact: LOW
        HGVSc: F52C6.5:n.916-3C>T
        Intron_number: 5/5
  Reference: WBPaper00037807
    WBPaper00005369
  Remark: [20081124 db] this Variation was previously named hw18961
  Method: WGS_Hawaiian_Waterston