WormBase Tree Display for Variation: WBVar00165763
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WBVar00165763 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00165763 | |||
Other_name | haw19013 | ||||
cewivar00179479 | |||||
F52C6.4.1:c.113-22C>A | |||||
F52C6.4.3:c.113-22C>A | |||||
F52C6.4.2:c.113-22C>A | |||||
HGVSg | CHROMOSOME_II:g.1923291C>A | ||||
Sequence_details | SMap | S_parent | Sequence | F52C6 | |
Flanking_sequences | tcgattttttttttggtttttattt | aatatatgtttattttttcaggaga | |||
Mapping_target | F52C6 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01361932 | |||
Status | Live | ||||
Affects | Gene | WBGene00018661 | |||
Transcript | F52C6.4.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F52C6.4.2:c.113-22C>A | ||||
Intron_number | 2/4 | ||||
F52C6.4.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F52C6.4.3:c.113-22C>A | ||||
Intron_number | 1/2 | ||||
F52C6.4.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F52C6.4.1:c.113-22C>A | ||||
Intron_number | 2/4 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw19013 | ||||
Method | WGS_Hawaiian_Waterston |