WormBase Tree Display for Variation: WBVar00166024

WBVar00166024 Name: Public_name: WBVar00166024
    Other_name: pas26784
      haw19274
      cewivar00083364
      F07E5.9.2:c.-711G>T
      F07E5.9.1:c.-27+1G>T
    HGVSg: CHROMOSOME_II:g.2080117C>A
  Sequence_details: SMap: S_parent: Sequence: T16A1
    Flanking_sequences: agttaagcgaaaaaaaaaccaacta cacaatgtcctaatcatttttcaat
    Mapping_target: T16A1
    Type_of_mutation: Substitution: C A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (12)
    Laboratory: RW
    Person: WBPerson1562
      WBPerson6900
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar00215008
    Status: Live
  Affects: Gene: WBGene00017214
    Transcript: F07E5.9.2 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F07E5.9.2:c.-711G>T
        cDNA_position: 188
        Exon_number: 1/11
      F07E5.9.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: F07E5.9.1:c.-27+1G>T
        Intron_number: 2/12
  Remark: [20081124 db] this Variation was previously named hw19274
  Method: WGS_Hawaiian_Waterston