WormBase Tree Display for Variation: WBVar00166535

WBVar00166535 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00166535
    Other_name: haw19785
      F54A3.6b.2:c.*497+88A>G
      F54A3.6b.1:c.*452+88A>G
      F54A3.6a.1:c.959+88A>G
    HGVSg: CHROMOSOME_II:g.2229105T>C
  Sequence_details: SMap: S_parent: Sequence: F54A3
    Flanking_sequences: tttttcagctcatttttcagcattt cgtcgatttttaagccatttccagt
    Mapping_target: F54A3
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
    History: Acquires_merge: WBVar01363005
    Status: Live
  Affects: Gene: WBGene00018785
    Transcript: F54A3.6a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F54A3.6a.1:c.959+88A>G
        Intron_number: 12/14
      F54A3.6b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F54A3.6b.1:c.*452+88A>G
        Intron_number: 13/14
      F54A3.6b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F54A3.6b.2:c.*497+88A>G
        Intron_number: 12/13
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw19785
  Method: WGS_Hawaiian_Waterston