WormBase Tree Display for Variation: WBVar00166856
expand all nodes | collapse all nodes | view schema
| WBVar00166856 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00166856 | |||
| Other_name | haw20106 | ||||
| cewivar00181128 | |||||
| CE46617:p.Leu43= | |||||
| F43C11.6.1:c.129A>G | |||||
| HGVSg | CHROMOSOME_II:g.2342565A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F43C11 | |
| Flanking_sequences | atttatcaatttttggagcatttct | gttaccatgtaaggttttcagagag | |||
| Mapping_target | F43C11 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01363473 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00018383 | |||
| Transcript | F43C11.6.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F43C11.6.1:c.129A>G | ||||
| HGVSp | CE46617:p.Leu43= | ||||
| cDNA_position | 137 | ||||
| CDS_position | 129 | ||||
| Protein_position | 43 | ||||
| Exon_number | 2/6 | ||||
| Codon_change | ctA/ctG | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw20106 | ||||
| Method | WGS_Hawaiian_Waterston |
