WormBase Tree Display for Variation: WBVar00166888
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WBVar00166888 | Name | Public_name | WBVar00166888 | ||
---|---|---|---|---|---|
Other_name | haw20138 | ||||
haw126580 | |||||
cewivar00181167 | |||||
F43C11.1b.1:c.165C>T | |||||
CE20785:p.Phe55= | |||||
CE46583:p.Phe55= | |||||
F43C11.1a.1:c.165C>T | |||||
HGVSg | CHROMOSOME_II:g.2357312C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F43C11 | |
Flanking_sequences | agacctacactccagagtgtggaaatttgacatcactttt | atcagtaggttttttttataacaaa | |||
Mapping_target | F43C11 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (17) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01232641 | |||
WBVar01363518 | |||||
WBVar01298391 | |||||
WBVar00546445 | |||||
Status | Live | ||||
Affects | Gene | WBGene00018378 | |||
Transcript | F43C11.1b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F43C11.1b.1:c.165C>T | ||||
HGVSp | CE46583:p.Phe55= | ||||
cDNA_position | 165 | ||||
CDS_position | 165 | ||||
Protein_position | 55 | ||||
Exon_number | 2/6 | ||||
Codon_change | ttC/ttT | ||||
Amino_acid_change | F | ||||
F43C11.1a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F43C11.1a.1:c.165C>T | ||||
HGVSp | CE20785:p.Phe55= | ||||
cDNA_position | 165 | ||||
CDS_position | 165 | ||||
Protein_position | 55 | ||||
Exon_number | 2/4 | ||||
Codon_change | ttC/ttT | ||||
Amino_acid_change | F | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw20138 | ||||
Method | WGS_Hawaiian_Waterston |