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WormBase Tree Display for Variation: WBVar00166889

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Name Class

WBVar00166889EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00166889
Other_namehaw20139
cewivar00181168
F43C11.1a.1:c.169+39T>A
F43C11.1b.1:c.169+39T>A
HGVSgCHROMOSOME_II:g.2357355T>A
Sequence_detailsSMapS_parentSequenceF43C11
Flanking_sequencesataacaaactaaatcactgatcgaaaatcacttttttctggcacaccacc
Mapping_targetF43C11
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00006629From_analysisMillion_mutation_project_reanalysis
WBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00023138From_analysisMillion_mutation_project_reanalysis
WBStrain00024204From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01363519
StatusLive
AffectsGeneWBGene00018378
TranscriptF43C11.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF43C11.1b.1:c.169+39T>A
Intron_number2/5
F43C11.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF43C11.1a.1:c.169+39T>A
Intron_number2/3
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw20139
MethodWGS_Hawaiian_Waterston