WormBase Tree Display for Variation: WBVar00167639
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WBVar00167639 | Name | Public_name | WBVar00167639 | ||
---|---|---|---|---|---|
Other_name | haw20889 | ||||
haw127161 | |||||
cewivar00181979 | |||||
CE26432:p.Phe272= | |||||
Y47G7B.1.1:c.816C>T | |||||
HGVSg | CHROMOSOME_II:g.2703619G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y47G7B | |
Flanking_sequences | acacaaaattgttgcaagcctgact | aagctcccgaaaatccacgaaaaaa | |||
Mapping_target | Y47G7B | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01364807 | |||
WBVar00547026 | |||||
Status | Live | ||||
Affects | Gene | WBGene00005345 | |||
Transcript | Y47G7B.1.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y47G7B.1.1:c.816C>T | ||||
HGVSp | CE26432:p.Phe272= | ||||
cDNA_position | 849 | ||||
CDS_position | 816 | ||||
Protein_position | 272 | ||||
Exon_number | 4/5 | ||||
Codon_change | ttC/ttT | ||||
Amino_acid_change | F | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw20889 | ||||
Method | WGS_Hawaiian_Waterston |