WormBase Tree Display for Variation: WBVar00168160
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| WBVar00168160 | Name | Public_name | WBVar00168160 | ||
|---|---|---|---|---|---|
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_II:g.2902609T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y110A2AM | |
| Flanking_sequences | ttgggggatttttcggaatttcgag | ttttttttcggccaaattttacaga | |||
| Mapping_target | Y110A2AM | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01365619 | |||
| WBVar00547441 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006710 | |||
| Transcript | Y110A2AR.2e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2e.1:c.670-769A>T | ||||
| Intron_number | 5/6 | ||||
| Y110A2AR.2h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2h.1:c.103-769A>T | ||||
| Intron_number | 1/1 | ||||
| Y110A2AR.2f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2f.1:c.1605+604A>T | ||||
| Intron_number | 6/7 | ||||
| Y110A2AR.2c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2c.1:c.1033-70A>T | ||||
| Intron_number | 2/2 | ||||
| Y110A2AR.2i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2i.1:c.1038+604A>T | ||||
| Intron_number | 3/4 | ||||
| Y110A2AR.2d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2d.1:c.1606-70A>T | ||||
| Intron_number | 6/8 | ||||
| Y110A2AR.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2b.1:c.670-70A>T | ||||
| Intron_number | 5/7 | ||||
| Y110A2AR.2g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2g.1:c.103-70A>T | ||||
| Intron_number | 1/1 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw21410 | ||||
| Method | WGS_Hawaiian_Waterston |
