WormBase Tree Display for Variation: WBVar00168166
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| WBVar00168166 | Name | Public_name | WBVar00168166 | ||
|---|---|---|---|---|---|
| Other_name (12) | |||||
| HGVSg | CHROMOSOME_II:g.2904626C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y110A2AM | |
| Flanking_sequences | aaaattgcaaaatttggccaatttt | gtggaaaaactggctttttcaggtt | |||
| Mapping_target | Y110A2AM | ||||
| Type_of_mutation | Substitution | C | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar00215223 | |||
| WBVar00547445 | |||||
| WBVar01365627 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006710 | |||
| Transcript | Y110A2AR.2e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2e.1:c.669+1008G>T | ||||
| Intron_number | 5/6 | ||||
| Y110A2AR.2h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2h.1:c.102+1008G>T | ||||
| Intron_number | 1/1 | ||||
| Y110A2AR.2f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2f.1:c.670-478G>T | ||||
| Intron_number | 5/7 | ||||
| Y110A2AR.2c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2c.1:c.97-478G>T | ||||
| Intron_number | 1/2 | ||||
| Y110A2AR.2i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2i.1:c.103-478G>T | ||||
| Intron_number | 2/4 | ||||
| Y110A2AR.2d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2d.1:c.670-478G>T | ||||
| Intron_number | 5/8 | ||||
| Y110A2AR.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2b.1:c.669+1008G>T | ||||
| Intron_number | 5/7 | ||||
| Y110A2AR.2g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2g.1:c.102+1008G>T | ||||
| Intron_number | 1/1 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw21416 | ||||
| Method | WGS_Hawaiian_Waterston |
