WormBase Tree Display for Variation: WBVar00168169
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| WBVar00168169 | Name | Public_name | WBVar00168169 | ||
|---|---|---|---|---|---|
| Other_name | haw21419 | ||||
| haw127583 | |||||
| Y110A2AR.2e.1:c.669+461C>T | |||||
| Y110A2AR.2c.1:c.96+467C>T | |||||
| Y110A2AR.2i.1:c.102+461C>T | |||||
| Y110A2AR.2f.1:c.669+461C>T | |||||
| Y110A2AR.2h.1:c.102+461C>T | |||||
| Y110A2AR.2g.1:c.102+461C>T | |||||
| Y110A2AR.2b.1:c.669+461C>T | |||||
| Y110A2AR.2d.1:c.669+461C>T | |||||
| HGVSg | CHROMOSOME_II:g.2905173G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y110A2AM | |
| Flanking_sequences | tttacaccgaaaaattgataaattt | ggcaattttcgtagttttcccggagaaattgccgaaaattccatggaaaaggggttttta | |||
| Mapping_target | Y110A2AM | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| History | Acquires_merge | WBVar01365633 | |||
| WBVar00547448 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006710 | |||
| Transcript | Y110A2AR.2e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2e.1:c.669+461C>T | ||||
| Intron_number | 5/6 | ||||
| Y110A2AR.2h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2h.1:c.102+461C>T | ||||
| Intron_number | 1/1 | ||||
| Y110A2AR.2f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2f.1:c.669+461C>T | ||||
| Intron_number | 5/7 | ||||
| Y110A2AR.2c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2c.1:c.96+467C>T | ||||
| Intron_number | 1/2 | ||||
| Y110A2AR.2i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2i.1:c.102+461C>T | ||||
| Intron_number | 2/4 | ||||
| Y110A2AR.2d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2d.1:c.669+461C>T | ||||
| Intron_number | 5/8 | ||||
| Y110A2AR.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2b.1:c.669+461C>T | ||||
| Intron_number | 5/7 | ||||
| Y110A2AR.2g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y110A2AR.2g.1:c.102+461C>T | ||||
| Intron_number | 1/1 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw21419 | ||||
| Method | WGS_Hawaiian_Waterston |
