WormBase Tree Display for Variation: WBVar00168889
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WBVar00168889 | Name | Public_name | WBVar00168889 | ||
---|---|---|---|---|---|
Other_name | haw22139 | ||||
haw128233 | |||||
cewivar00182895 | |||||
C17F4.6c.1:c.260+128A>T | |||||
C17F4.6a.1:c.260+128A>T | |||||
C17F4.6b.1:c.260+128A>T | |||||
HGVSg | CHROMOSOME_II:g.3258620T>A | ||||
Sequence_details | SMap | S_parent | Sequence | C17F4 | |
Flanking_sequences | ctcaaaccagcctaatcttaagatt | acaacaaaatttccggttttttgac | |||
Mapping_target | C17F4 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01366975 | |||
WBVar00548098 | |||||
Status | Live | ||||
Affects | Gene | WBGene00001544 | |||
Transcript | C17F4.6b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C17F4.6b.1:c.260+128A>T | ||||
Intron_number | 2/21 | ||||
C17F4.6c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C17F4.6c.1:c.260+128A>T | ||||
Intron_number | 2/22 | ||||
C17F4.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C17F4.6a.1:c.260+128A>T | ||||
Intron_number | 3/23 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw22139 | ||||
Method | WGS_Hawaiian_Waterston |