WormBase Tree Display for Variation: WBVar00169497
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| WBVar00169497 | Name | Public_name | WBVar00169497 | ||
|---|---|---|---|---|---|
| Other_name | haw22747 | ||||
| haw128725 | |||||
| cewivar00183197 | |||||
| Y49F6B.1e.1:c.795-161A>T | |||||
| Y49F6B.1b.1:c.801-161A>T | |||||
| Y49F6B.1a.1:c.786-161A>T | |||||
| Y49F6B.1d.1:c.792-161A>T | |||||
| Y49F6B.1c.1:c.798-161A>T | |||||
| Y49F6B.1f.1:c.792-161A>T | |||||
| HGVSg | CHROMOSOME_II:g.3509075A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y49F6B | |
| Flanking_sequences | aaaaaaaaccatttttcgcataaaa | ccgctcgaaaaaagtgaaaaatcgg | |||
| Mapping_target | Y49F6B | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01368013 | |||
| WBVar00548590 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021714 | |||
| Transcript | Y49F6B.1f.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y49F6B.1f.1:c.792-161A>T | ||||
| Intron_number | 7/7 | ||||
| Y49F6B.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y49F6B.1e.1:c.795-161A>T | ||||
| Intron_number | 7/7 | ||||
| Y49F6B.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y49F6B.1a.1:c.786-161A>T | ||||
| Intron_number | 8/9 | ||||
| Y49F6B.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y49F6B.1c.1:c.798-161A>T | ||||
| Intron_number | 7/7 | ||||
| Y49F6B.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y49F6B.1d.1:c.792-161A>T | ||||
| Intron_number | 7/7 | ||||
| Y49F6B.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y49F6B.1b.1:c.801-161A>T | ||||
| Intron_number | 7/8 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw22747 | ||||
| Method | WGS_Hawaiian_Waterston |
