WormBase Tree Display for Variation: WBVar00169890
expand all nodes | collapse all nodes | view schema
WBVar00169890 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00169890 | |||
Other_name | pas32726 | ||||
haw23140 | |||||
cewivar00011231 | |||||
C46E10.1.1:c.249-68C>A | |||||
HGVSg | CHROMOSOME_II:g.3724900C>A | ||||
Sequence_details | SMap | S_parent | Sequence | C46E10 | |
Flanking_sequences | caggcatagtcacgtctgtaggcat | aggtaggcatagacacaagacagcc | |||
Mapping_target | C46E10 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (39) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar01303663 | |||
WBVar00220950 | |||||
WBVar01237416 | |||||
WBVar01368660 | |||||
Status | Live | ||||
Affects | Gene | WBGene00016707 | |||
Transcript | C46E10.1.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C46E10.1.1:c.249-68C>A | ||||
Intron_number | 3/8 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw23140 | ||||
Method | WGS_Hawaiian_Waterston |