WormBase Tree Display for Variation: WBVar00169919

WBVar00169919 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00169919
    Other_name: haw23169
      cewivar00011309
      C46E10.9:n.1507-5C>T
      C46E10.8.1:c.-589C>T
    HGVSg: CHROMOSOME_II:g.3728023G>A
  Sequence_details: SMap: S_parent: Sequence: C46E10
    Flanking_sequences: tggagccgaagaggtcagatcctga aagatgtattagttttgaagcatta
    Mapping_target: C46E10
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (31)
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01303742
    Status: Live
  Affects: Gene: WBGene00016712
      WBGene00016713
    Transcript: C46E10.8.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C46E10.8.1:c.-589C>T
        cDNA_position: 74
        Exon_number: 1/9
    Pseudogene: C46E10.9 VEP_consequence: splice_region_variant,intron_variant,non_coding_transcript_variant
        VEP_impact: LOW
        HGVSc: C46E10.9:n.1507-5C>T
        Intron_number: 6/6
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw23169
  Method: WGS_Hawaiian_Waterston