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WormBase Tree Display for Variation: WBVar00169939

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Name Class

WBVar00169939NamePublic_nameWBVar00169939
Other_namehaw23189
haw129101
cewivar00011380
CE20674:p.Lys115=
F12E12.5.1:c.345G>A
HGVSgCHROMOSOME_II:g.3730961C>T
Sequence_detailsSMapS_parentSequenceF12E12
Flanking_sequencescgggacagtcgaaatgtgatctttcttgagatggttgtgcaggtgccttt
Mapping_targetF12E12
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (36)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01237527
WBVar01368768
WBVar01303797
WBVar00548966
StatusLive
AffectsGeneWBGene00017406
TranscriptF12E12.5.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF12E12.5.1:c.345G>A
HGVSpCE20674:p.Lys115=
cDNA_position620
CDS_position345
Protein_position115
Exon_number5/8
Codon_changeaaG/aaA
Amino_acid_changeK
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw23189
MethodWGS_Hawaiian_Waterston