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WormBase Tree Display for Variation: WBVar00170175

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Name Class

WBVar00170175NamePublic_nameWBVar00170175
Other_namehaw23425
haw129286
cewivar00011863
F54D10.4.1:c.539-18C>A
HGVSgCHROMOSOME_II:g.3806037G>T
Sequence_detailsSMapS_parentSequenceF54D10
Flanking_sequencesgaagtcgtctgaattcaaacaaatttttaattgtattacggaaatgcgta
Mapping_targetF54D10
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (109)
LaboratoryRW
QX
AX
PersonWBPerson1562
WBPerson4037
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01437190
WBVar00549151
WBVar01369124
WBVar01304183
WBVar01237889
StatusLive
AffectsGeneWBGene00018805
TranscriptF54D10.4.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54D10.4.1:c.539-18C>A
Intron_number5/7
ReferenceWBPaper00038208
WBPaper00040707
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw23425
MethodWGS_Hawaiian_Waterston