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WormBase Tree Display for Variation: WBVar00170540

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Name Class

WBVar00170540EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00170540
Other_namehaw23790
cewivar00012133
F53C3.13b.1:c.849-367A>T
F53C3.13f.1:c.855-367A>T
F53C3.13e.1:c.849-367A>T
F53C3.13d.2:c.849-367A>T
F53C3.13d.1:c.849-367A>T
F53C3.13a.1:c.849-367A>T
F53C3.13c.1:c.849-367A>T
HGVSgCHROMOSOME_II:g.3924935T>A
Sequence_detailsSMapS_parentSequenceF53C3
Flanking_sequencestatataaaatattaattttttttttaattgtctgttttgaaaaaaatatt
Mapping_targetF53C3
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (29)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01369679
StatusLive
AffectsGeneWBGene00018756
TranscriptF53C3.13e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13e.1:c.849-367A>T
Intron_number4/6
F53C3.13b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13b.1:c.849-367A>T
Intron_number4/6
F53C3.13d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13d.1:c.849-367A>T
Intron_number4/7
F53C3.13a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13a.1:c.849-367A>T
Intron_number4/6
F53C3.13d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13d.2:c.849-367A>T
Intron_number4/6
F53C3.13f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13f.1:c.855-367A>T
Intron_number4/6
F53C3.13c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13c.1:c.849-367A>T
Intron_number4/6
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw23790
MethodWGS_Hawaiian_Waterston