WormBase Tree Display for Variation: WBVar00170598
expand all nodes | collapse all nodes | view schema
WBVar00170598 | Name | Public_name | WBVar00170598 | ||
---|---|---|---|---|---|
Other_name | haw23848 | ||||
haw129618 | |||||
cewivar00012233 | |||||
K10G6.3h.1:c.20+59A>T | |||||
K10G6.3g.1:c.20+59A>T | |||||
K10G6.3f.1:c.20+59A>T | |||||
K10G6.3i.1:c.20+59A>T | |||||
HGVSg | CHROMOSOME_II:g.3950455A>T | ||||
Sequence_details | SMap | S_parent | Sequence | T20H12 | |
Flanking_sequences | ttattgattttttggctttttattt | aaaaattgtgaaaattcgtctttat | |||
Mapping_target | T20H12 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (37) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01369771 | |||
WBVar01238249 | |||||
WBVar00549483 | |||||
WBVar01304563 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004751 | |||
Transcript | K10G6.3i.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K10G6.3i.1:c.20+59A>T | ||||
Intron_number | 1/13 | ||||
K10G6.3f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K10G6.3f.1:c.20+59A>T | ||||
Intron_number | 1/14 | ||||
K10G6.3g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K10G6.3g.1:c.20+59A>T | ||||
Intron_number | 1/14 | ||||
K10G6.3h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K10G6.3h.1:c.20+59A>T | ||||
Intron_number | 1/9 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw23848 | ||||
Method | WGS_Hawaiian_Waterston |