WormBase Tree Display for Variation: WBVar00170623
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WBVar00170623 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00170623 | |||
Other_name | haw23873 | ||||
cewivar00012287 | |||||
K10G6.3h.1:c.95+2189C>T | |||||
K10G6.3f.1:c.95+2189C>T | |||||
K10G6.3i.1:c.95+2189C>T | |||||
K10G6.3g.1:c.95+2189C>T | |||||
HGVSg | CHROMOSOME_II:g.3953522C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T20H12 | |
Flanking_sequences | tttgaattttggggttccagacagg | ccttctttaaccgcgcctgcctacc | |||
Mapping_target | T20H12 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (37) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01369813 | |||
WBVar01238298 | |||||
WBVar01304611 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004751 | |||
Transcript | K10G6.3i.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K10G6.3i.1:c.95+2189C>T | ||||
Intron_number | 2/13 | ||||
K10G6.3f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K10G6.3f.1:c.95+2189C>T | ||||
Intron_number | 2/14 | ||||
K10G6.3g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K10G6.3g.1:c.95+2189C>T | ||||
Intron_number | 2/14 | ||||
K10G6.3h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K10G6.3h.1:c.95+2189C>T | ||||
Intron_number | 2/9 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw23873 | ||||
Method | WGS_Hawaiian_Waterston |