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WormBase Tree Display for Variation: WBVar00170849

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Name Class

WBVar00170849NamePublic_nameWBVar00170849
Other_nameuCE2-1532
haw24099
cewivar00012604
T08H4.1c.1:c.351-255A>G
T08H4.1a.1:c.-511-255A>G
T08H4.1a.3:c.-511-255A>G
T08H4.1b.2:c.-76-255A>G
T08H4.1b.1:c.-76-255A>G
HGVSgCHROMOSOME_II:g.4108955A>G
Sequence_detailsSMapS_parentSequenceT08H4
Flanking_sequencesgcaatgtgggtggatgactggaagccgtagattattcaaaaaaaaaattc
Mapping_targetT08H4
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (37)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
SNP_Swan
HistoryAcquires_mergeWBVar00268626
WBVar01304959
StatusLive
AffectsGeneWBGene00006476
TranscriptT08H4.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1a.1:c.-511-255A>G
Intron_number1/15
T08H4.1a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1a.3:c.-511-255A>G
Intron_number1/15
T08H4.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1b.1:c.-76-255A>G
Intron_number1/14
T08H4.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1c.1:c.351-255A>G
Intron_number1/13
T08H4.1b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1b.2:c.-76-255A>G
Intron_number1/14
ReferenceWBPaper00037807
WBPaper00005369
Remark[20081124 db] this Variation was previously named hw24099
MethodWGS_Hawaiian_Waterston