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WormBase Tree Display for Variation: WBVar00170862

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Name Class

WBVar00170862EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00170862
Other_namehaw24112
cewivar00012616
T08H4.1a.1:c.-81+928T>C
T08H4.1c.1:c.781+928T>C
T08H4.1b.3:c.355+928T>C
T08H4.1a.2:c.-81+928T>C
T08H4.1a.4:c.-81+928T>C
T08H4.1b.1:c.355+928T>C
T08H4.1b.2:c.355+928T>C
T08H4.1a.3:c.-81+928T>C
HGVSgCHROMOSOME_II:g.4113532T>C
Sequence_detailsSMapS_parentSequenceT08H4
Flanking_sequencestacatcatttcaaaactgtgcacatttaaaaaatttggaaatttaccaaa
Mapping_targetT08H4
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (38)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01238638
WBVar01304973
WBVar01370172
StatusLive
AffectsGeneWBGene00006476
TranscriptT08H4.1a.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1a.4:c.-81+928T>C
Intron_number3/14
T08H4.1a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1a.3:c.-81+928T>C
Intron_number4/15
T08H4.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1b.1:c.355+928T>C
Intron_number5/14
T08H4.1b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1b.3:c.355+928T>C
Intron_number4/13
T08H4.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1a.2:c.-81+928T>C
Intron_number3/14
T08H4.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1a.1:c.-81+928T>C
Intron_number4/15
T08H4.1b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1b.2:c.355+928T>C
Intron_number5/14
T08H4.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1c.1:c.781+928T>C
Intron_number4/13
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw24112
MethodWGS_Hawaiian_Waterston