WormBase Tree Display for Variation: WBVar00170862
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WBVar00170862 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00170862 | |||
Other_name | haw24112 | ||||
cewivar00012616 | |||||
T08H4.1a.1:c.-81+928T>C | |||||
T08H4.1c.1:c.781+928T>C | |||||
T08H4.1b.3:c.355+928T>C | |||||
T08H4.1a.2:c.-81+928T>C | |||||
T08H4.1a.4:c.-81+928T>C | |||||
T08H4.1b.1:c.355+928T>C | |||||
T08H4.1b.2:c.355+928T>C | |||||
T08H4.1a.3:c.-81+928T>C | |||||
HGVSg | CHROMOSOME_II:g.4113532T>C | ||||
Sequence_details | SMap | S_parent | Sequence | T08H4 | |
Flanking_sequences | tacatcatttcaaaactgtgcacat | ttaaaaaatttggaaatttaccaaa | |||
Mapping_target | T08H4 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (38) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01238638 | |||
WBVar01304973 | |||||
WBVar01370172 | |||||
Status | Live | ||||
Affects | Gene | WBGene00006476 | |||
Transcript | T08H4.1a.4 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T08H4.1a.4:c.-81+928T>C | ||||
Intron_number | 3/14 | ||||
T08H4.1a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T08H4.1a.3:c.-81+928T>C | ||||
Intron_number | 4/15 | ||||
T08H4.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T08H4.1b.1:c.355+928T>C | ||||
Intron_number | 5/14 | ||||
T08H4.1b.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T08H4.1b.3:c.355+928T>C | ||||
Intron_number | 4/13 | ||||
T08H4.1a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T08H4.1a.2:c.-81+928T>C | ||||
Intron_number | 3/14 | ||||
T08H4.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T08H4.1a.1:c.-81+928T>C | ||||
Intron_number | 4/15 | ||||
T08H4.1b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T08H4.1b.2:c.355+928T>C | ||||
Intron_number | 5/14 | ||||
T08H4.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T08H4.1c.1:c.781+928T>C | ||||
Intron_number | 4/13 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw24112 | ||||
Method | WGS_Hawaiian_Waterston |