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WormBase Tree Display for Variation: WBVar00170870

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Name Class

WBVar00170870NamePublic_nameWBVar00170870
Other_name (11)
HGVSgCHROMOSOME_II:g.4114809C>G
Sequence_detailsSMapS_parentSequenceT08H4
Flanking_sequencescttgcctacacctgccttttgcctacttcccatatgaatgtaactttttt
Mapping_targetT08H4
Type_of_mutationSubstitutionCG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (38)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01238648
WBVar00549695
WBVar01304981
WBVar01370181
StatusLive
AffectsGeneWBGene00006476
TranscriptT08H4.1a.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1a.4:c.-81+2205C>G
Intron_number3/14
T08H4.1a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1a.3:c.-81+2205C>G
Intron_number4/15
T08H4.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1b.1:c.355+2205C>G
Intron_number5/14
T08H4.1b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1b.3:c.355+2205C>G
Intron_number4/13
T08H4.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1a.2:c.-81+2205C>G
Intron_number3/14
T08H4.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1a.1:c.-81+2205C>G
Intron_number4/15
T08H4.1b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1b.2:c.355+2205C>G
Intron_number5/14
T08H4.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT08H4.1c.1:c.781+2205C>G
Intron_number4/13
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw24120
MethodWGS_Hawaiian_Waterston