WormBase Tree Display for Variation: WBVar00171115

WBVar00171115 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00171115
    Other_name: pas34435
      haw24365
      cewivar00012856
      C16A11.1a.2:c.453-133G>T
      C16A11.1b.1:c.951-133G>T
      C16A11.1a.1:c.453-133G>T
    HGVSg: CHROMOSOME_II:g.4254087G>T
  Sequence_details: SMap: S_parent: Sequence: C16A11
    Flanking_sequences: aaattgtgcatttttgtttaaattt ttctaaaattttgaaaaaaacgtac
    Mapping_target: C16A11
    Type_of_mutation: Substitution: G T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (19)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar01305223
        WBVar00222659
        WBVar01370539
    Status: Live
  Affects: Gene: WBGene00001673
    Transcript: C16A11.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C16A11.1a.1:c.453-133G>T
        Intron_number: 6/10
      C16A11.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C16A11.1b.1:c.951-133G>T
        Intron_number: 5/7
      C16A11.1a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C16A11.1a.2:c.453-133G>T
        Intron_number: 4/8
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw24365
  Method: WGS_Hawaiian_Waterston