WormBase Tree Display for Variation: WBVar00171456
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WBVar00171456 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00171456 | |||
Other_name | haw24706 | ||||
cewivar00184243 | |||||
W06B4.2.1:c.1224A>G | |||||
CE02891:p.Thr408= | |||||
HGVSg | CHROMOSOME_II:g.4470561A>G | ||||
Sequence_details | SMap | S_parent | Sequence | W06B4 | |
Flanking_sequences | agaagcataaaattgccgattttac | gtttctctcgcggaacgaactgacg | |||
Mapping_target | W06B4 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Million_mutation_project_reanalysis | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01305621 | |||
WBVar01371008 | |||||
Status | Live | ||||
Affects | Gene | WBGene00021057 | |||
Transcript | W06B4.2.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | W06B4.2.1:c.1224A>G | ||||
HGVSp | CE02891:p.Thr408= | ||||
cDNA_position | 1225 | ||||
CDS_position | 1224 | ||||
Protein_position | 408 | ||||
Exon_number | 6/8 | ||||
Codon_change | acA/acG | ||||
Amino_acid_change | T | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw24706 | ||||
Method | WGS_Hawaiian_Waterston |